CDS

Accession Number TCMCG057C54861
gbkey CDS
Protein Id XP_018460843.1
Location complement(join(22085..22204,22285..22404,22493..22578,22672..22744,22820..23230,23404..23730,23824..24475,24581..24644,24727..24859,24958..25063,25414..25547,25629..26252))
Gene LOC108831834
GeneID 108831834
Organism Raphanus sativus

Protein

Length 949aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018605341.1
Definition PREDICTED: lysine-specific demethylase JMJ25-like isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category O
Description A domain family that is part of the cupin metalloenzyme superfamily.
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K15601        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04714        [VIEW IN KEGG]
map04714        [VIEW IN KEGG]
GOs GO:0000785        [VIEW IN EMBL-EBI]
GO:0000976        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006482        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008214        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016577        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031490        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032451        [VIEW IN EMBL-EBI]
GO:0032452        [VIEW IN EMBL-EBI]
GO:0032454        [VIEW IN EMBL-EBI]
GO:0033169        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070076        [VIEW IN EMBL-EBI]
GO:0070988        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1990837        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGGCGAACGAGGCGATCCCTGACGAGTTCCGGTGCAACCGCTCAGACGGGAAGCAATGGCGGTGCAAGAGACGGGCTTTGGAAGGGAAGAAGCTCTGCGAGACTCACACCTCTCAGCTCACTCTGAAGCGGGACAGGGAGAAAGCTGCTGCTGCTGCTGCTGCTGCGTCGTCGACGATGAAGCTCGCTAGATCAAGTAAAGGAGACGAATCGGCGTCTTCAAAGGAAGGAGGGATTATTAGGGATAGTGAATTGGGGGAATCGAAGAAGAGGAAGCGAGAAGCAGAGGAGGCTGATGATGACGAAGCGGTGAGGAAGATGCAGTTGGATTTGATAGGGTTGGCGTTGAAGAGAGAAGCTGAGAAGAAGAACAAGAAGAAGATACCAAAGAAGATACCAAAGAAGAAGGAGAAGAAGAAGAAGAAAGGGTTTAATGGTTTTGTTGGGGAAGAGTTAACGAAGGTTCTACCTAATGGCATTATGTCTATCTCTCCACCTTCTCCCACTACAAGCGATGTCTCATCTCCTTGTGACGTTAAAGTAGGACAAGAAGCTATCTCCATCACTAGTAGAAGATTCAGGTCTAAGAACATTGACCGTTTTCCTTTTCGGAAGATGCAGGCGGTTCCTTTCAAGGGTAAATTGGTTAATGCAAAGAAGAGGTGTCATTGGTGTGGAACCAGAGGATCTGAGGACTTGATTAGCTGTCTGAGTTGTGAACGAAACTTCTTTTGCGTTGATTGTATCGAGAAAAGGAACAAGGGATCAAAAGAAGAAGTTGAGAAAAAATGCCCTGTATGCTGTGGATCATGTAGGTGCAAGTCTTGCTTAGCCACTCTGTCTGGAGTCACTGAATGTAAGAATTCTCGGAATGTTAGGAATGATATTGACAGGGTTTTGCATCTACACTATGCTGTGTGCATGCTTCTTCCAGTATTGAAAGGAATCAACTCAGAAGACAATGTAGAGGTCGAAAATGGCACAGAAACGAAAGGGGGAAATCTAGATGAACGGCAATTCCATAGCTCTGAATTAACCTCTGATGATCAACAACCCTGTTGTGACTCTGCCATTGTGGATTCTCAAAAAAATTGCACCTGCAGCTCCTCTGTTCTTAGGCGGAGTTCTGATGGAGACAGGAGTCAAGGGAGCTTGTCCAGAAAGGTTGGGTTAGTTAAATACTCGAATGGTATAGAATCTGGTAAGCCACCCTTATCTGATGCTTGGGATCAATCTCTAAAAGAAGCTCTAACGGATTGTAAGCTGAAAGAAGTCAAAGGCCGCAGGAATAACCTTTCCTTGAGAAGTTTATACTCTCTGGAGCTGACAAGAAAGTTAGAGACCAGTGCAGAGGAAATAGTCAGTTGCTATGAGTTGCCTGAAGTCTTAGATAGATACTTGGGATGCCCATTTTGTCTTGGAAGAGAAAAGCAATCTGCTAATAGTACTGACAGCCATTTGAAAGAAGCATCCAGGAGATGTGATGACGTGACTGGTAACTTTTTGTACTATCCCACAGTGATGGGTTTTCAGCAAAACAATCTCGAACATTTTCAGACACACTGGAGCAAAGGGCATCCTGTTATAGTTCGTAGTGTGTTAAAGGGAGGCTCAACCCTTAACTGGGATCCAGTAGCCATGTTCTGTAGCTATCTTAGGAACAGCAATAGAAAAATCGGCAATATAACTGATTGCATGGATTGGTTTGAGGTAGAAGTTGGGGTAAAGCAAGTTTTTCTTGGGTCTTTGAGAGGAAAGGCTGAGACTAATACTTGTCAAGAGAGACTGAAGCTGGATGGATGGCTTTCATCTTCTCTGTTTAAAGAACATTTCCCAAACCATTATGCTGAAATACTGAGAGTATTACCACTTCCTCATTACATGGATCCGAGGTGTGGTCTACTAAATATGGCTGCCGACCTACCTGACAGTATCCAGACACCCAAGCTAGGTCCATGCCTCAGTATTTCCTACAGGAGTGGTGAGGATGCAAAGCCTGATTATGTGAAGAAGTTAGGTTTTGAAACTTGTGACACGGTCGATATCTTGTTGCATGTCACAGAAACAGAAGTTTCCACAAAACAGATCTGCAGAATAAGAAAGCTAATGAGAAAAATCGGAAGAGTAAGATCTAAAACCCCAGGAAAGGTCAAGGAGAGCAGATTTGGTAGGGGAAACAGACTAGATAGGAATGACGCTTCATATGTTCAGATGGATCTGCCGGACGACTATTCTAGTTCTGACTCAGAATCTTCACAACTTTGTTTAGGCAGTGAGTTTCAGGTAGAGGAAAGAGAAAGTTCCAATGACTCCTGTGTAGACGAAAGCCTAAGCAACTCTTGTGGTGCACAATGGGATGTATTCCGGACGCAAGATGTTTCTAAACTTCTTGACTATATGAACAACCATTATCTTGAGCTAGCATCCATGGATTCCACCAAAACAAAAGCAAGTCATCCATTACTTGAGCAGAGTTACTACCTTGATGAGTATCACAAAGCAAGGCTTAAAGAAGAATTTGACGTTGAACCATGGAGTTTTGATCAATGTGTTGGGGAAGCAGTCATCGTCCCTGCTGGATGTCCATACCAAAATAGAAAGAACACGTCTTGCGTAAATGCGGTCCTGAATTTTCTTTCACCTGAGCACGTTACTGAATCTATCAAACGAGTGGACGAGCTTAATCAACTTCCCCAGAGCCTCAAAACGAAAGCAAACAAGATTGAGGTGAAGAAAATGGCGATCCATAAAGTCAGCGAAGCTATAAAGGAAATCCGGGAGCGGACATCTTCAGATTCAAGCGCTGCATCGAGATTTATAACTAGAACTAGAGGTACCAAATCTTGA
Protein:  
MSANEAIPDEFRCNRSDGKQWRCKRRALEGKKLCETHTSQLTLKRDREKAAAAAAAASSTMKLARSSKGDESASSKEGGIIRDSELGESKKRKREAEEADDDEAVRKMQLDLIGLALKREAEKKNKKKIPKKIPKKKEKKKKKGFNGFVGEELTKVLPNGIMSISPPSPTTSDVSSPCDVKVGQEAISITSRRFRSKNIDRFPFRKMQAVPFKGKLVNAKKRCHWCGTRGSEDLISCLSCERNFFCVDCIEKRNKGSKEEVEKKCPVCCGSCRCKSCLATLSGVTECKNSRNVRNDIDRVLHLHYAVCMLLPVLKGINSEDNVEVENGTETKGGNLDERQFHSSELTSDDQQPCCDSAIVDSQKNCTCSSSVLRRSSDGDRSQGSLSRKVGLVKYSNGIESGKPPLSDAWDQSLKEALTDCKLKEVKGRRNNLSLRSLYSLELTRKLETSAEEIVSCYELPEVLDRYLGCPFCLGREKQSANSTDSHLKEASRRCDDVTGNFLYYPTVMGFQQNNLEHFQTHWSKGHPVIVRSVLKGGSTLNWDPVAMFCSYLRNSNRKIGNITDCMDWFEVEVGVKQVFLGSLRGKAETNTCQERLKLDGWLSSSLFKEHFPNHYAEILRVLPLPHYMDPRCGLLNMAADLPDSIQTPKLGPCLSISYRSGEDAKPDYVKKLGFETCDTVDILLHVTETEVSTKQICRIRKLMRKIGRVRSKTPGKVKESRFGRGNRLDRNDASYVQMDLPDDYSSSDSESSQLCLGSEFQVEERESSNDSCVDESLSNSCGAQWDVFRTQDVSKLLDYMNNHYLELASMDSTKTKASHPLLEQSYYLDEYHKARLKEEFDVEPWSFDQCVGEAVIVPAGCPYQNRKNTSCVNAVLNFLSPEHVTESIKRVDELNQLPQSLKTKANKIEVKKMAIHKVSEAIKEIRERTSSDSSAASRFITRTRGTKS